CDS

Accession Number TCMCG017C20314
gbkey CDS
Protein Id OMO83377.1
Location complement(join(20711..20806,21062..21121,21277..21395,21473..21571,21698..21881,21958..22054,22145..22203,22283..22406,22540..22664,22772..22926,23084..23330,23479..23606,23915..23978,24077..24172,24261..24455,24567..24884,25054..25444,25585..25648,26042..26145,26254..26345,26474..26527,26652..26736,26899..27029,28286..28327))
GeneID InterPro:IPR001680
Organism Corchorus olitorius
locus_tag COLO4_22550

Protein

Length 1042aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017980.1
Definition hypothetical protein COLO4_22550 [Corchorus olitorius]
Locus_tag COLO4_22550

EGGNOG-MAPPER Annotation

COG_category U
Description Transducin WD40 repeat-like superfamily protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08518        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000149        [VIEW IN EMBL-EBI]
GO:0002791        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005096        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017075        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0017157        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0030141        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030695        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043547        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045921        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050708        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051046        [VIEW IN EMBL-EBI]
GO:0051047        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0060589        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0099503        [VIEW IN EMBL-EBI]
GO:1903530        [VIEW IN EMBL-EBI]
GO:1903532        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTGTTAAGAAGCTGCTGGTGGAGAAGGCCTCCAAGAAGCCTGGAGGAATTTCTGATGCTTTGAAAGCTAGTGATGTAGACCCACATTTGGTATTTCATTATGGGATCCCATTGGGTTGTTGTATGTTTGCTTATGATTCCCTTCAAAAGATACTGGCAATTTCTACTATAGATGGCAGAATTAAACTCTTTGGAAGAGATAACTCTCAAGCTCTTCTTGAATCTGATGATGCAGTGCCAAGCAAGTTTTTGGAGTTCATCCAGAACCAAGGCATCCTTGTAAATGTAAATTTGAAGAATCATATTGAGGTTTGGGATTTGGACAAGAAGCTGTTGTCTCATGTACATGTCCTCAAAGAAGACATTACTTCTTTCACAGTTATGCAGAGTGGTTCCTACATGTATGCTGGGGATTCTGTTGGCAACATTAAGGTTTTGAAGATTGACCAAGAGCTAGGTCATGTTGTACAAATGAAATACATTATACCTTTCTCAGCTTCTCATGGAAATCCGACGGAAGTTTCAGCTGTTGTCTCCATAATGCCTCAACCAACAGCAGAAAGCAAAAGAATTCTTTTAATCTTTAAAGACGGCTTCATCACTTTGTGGGAAATTAGAGAGAGCAAAGCTATTTTGGTTACAGGTGGCAGTATGTTCCAATCAGTAAATAGTGAAGCAAAGCATGTGACTTCTGCATGCTGGGTATGCCCTTTTGGTAGTAAGGTTGCTGTTGGTTACAGTAATGGAGAAATTCTCATATGGAGTGTTCCTACCTCAAAGCTAAATAATGAACCCGCATCCGAAAGTAGCATTCAAAATGCTCCAATTTGCAAACTCATTCTTGGATTTAGATCAGATAAGATTCCAATAACATGGTTAAAATGGTCCTATGCCGATGCAAAAGCCACCAGACTATATGTCATGGGTGCCTCAGATGTAGCCTTCACAAGCATGTTGCAGGTGGTCTTATTGAACGAGCATACTGAATCTCGCACCATTAAGCTTGGGCTTCATTTGACTGAGCCTTGTGTGGACATGGTGATCACTTCAAGAAGTACCGAGCAAAGCAAAGTTAGAGAAGATTTCCTCCTCTTGATTGGAAAATCAGGAAAAATTTATATGTATGATGATTGCTCAATTGAGAGGTATCTTCTGCAATGCCAATCAAGGTCACCGCCTTCCCTCCCAAAGGAGGTAATGCTGAAGATGCCGTTTGCAGATTCAAACATCACAGTAGCTAAACTAACTACTGACAACCCTGCGTTAAGTTCGGATGTGGATTACATTCTTCTTTCCAAGGATATTCCGTCACTTGTTCCCTTGGAGACAAAGCCAAAAGATGGATGTCACTACCAATTTAGTGGTTTTGGCAAGGTAAAAAACCTGTACATAACCGGACACAGTGATGGAGCCATCAATTTTTGGGATTTATCATGCCCCTTTCCTATACCAGTTCTGTCATTAAAGCAACAGAGCGAAGATAATTTTTCTTTGAGTGGTGTAGCTCTGTCTGCGTTGTATTTTGATAGAGACTCTCGGATTCTAGTTTCTGGTGACCAGAGTGGAATGGTTCGCATCTTTCAGTTTAAGCCAGAGCCATATACAACAGAAAACAGTTTCATTTCTTTCCAAGTAAGCTCAAAGAAAGGGAATAATCACGTTATCCAGAGTCTTAAGGTCCTTAAAGTTAATGGTTCTGTACTCTCTCTAAACATAAGTCACAGCACAAGCTATCTTGCCATTGGGTCTGATCAAGGAGACGTTTCACTAGTTGACATGGAAGGTCCCAGTGTCATATTTCAAAGTCATATTGCAAGTGATATCTGTCCTGGCATCATTTCACTGCAGTTTAAAACCTGTAGTCTGCAAAATTTTGAAAAGAATGTTCTGGTGGCTGCTATGAAGGATTCATCAGTTTGGGCCTTTGACAGTAATACCGGAAACATGCTGACTACTAGCATGGTTCGCCCGAAGAAACCCTCAAGAGCTCTATTTATGCAGATTTTGGATTGGCAGGATTTGTTGGTTAGGGGAGCAAATATGTCAAATAGTCCAGACACAAGCAGAGGGAGTCCTGTTGAGGAAGGCATATCAAAGCAATCATACATACTGATATGTTCGGAGAAGGCTGCATATGTCTATTCCTTGATTCATGCTATTCAGGGAGTCAAAAAGGTGCACTACAAGAAGAAGTTTAATTCTACTTCTTGCTGCTGGGCATCAACATTTTATACCGCCACCGATGTTGGCCTTATGCTCCTCTTCACTAGTGGAAAAGTTGAAATAAGGTCCTTGCCAGAGTTATCCTTGTTGAAGGAAACTTCAATCAGAGGTCTCAGATATTCTACACCGAAGCAAAACTCATCATCCGACAACTCAATTGGCTTTTCAAACTGTGGAGATTTTGTAATGGTTAACGGGGATCAAGAACTCTTTATTGTCTCAGTTTTGCTCCAGAAGGAAAGTTTTAGGATTCTGGACTCTATCAGCCGTGTCTATAGGAAAGAATTGATGCTTTCACAGGAAGTGCTTGCCTCTGGAACCATGATTCAGAAGGAGAAGAAGAAGGGAATTTTCGGGTCTGTTCTCAAAGACATAACAGGCAGTAAAAAGAATGTCCATGTGCATGAAGTGGAGACAGAAGATACGAAAGAAAGTATTGAAGAACTTTTGACCATCTTTTCAACTGCTAATTTTCCGTCTGAGGTTGAAAATAGAGATAATCAGGAAGATGATTTTGATTTAGACATTGATGATATTGACCTTGATGATTCTGGAGAGAAACCCAAAGAACACAACATTTTAGCAAGTCTTAATAAGCACAAGCTTAAATTTCAGGCTTTTACAGCAGGTAAATTAAAACAGATGAAGTCAAAAAATGATAAACCAATCGCCAAAGAAGAGCAGCAAGATGAGAAGCCCAGTGCTGTTGATCAAATCAAGAAAAAATATGGCTTTTCTTCCCAGGGTGAATCAAGTGCTGCTAAAATGGCAGAAAACAAGCTTCATGAAAATTTGAGAAAATTGCAGGGAATCAGCTTGAAAACCACAGAGATGCAAGACACTGCAAAATCATTCTCTTCAATGGCAAGAGAACTGCTACGTACTACAGAACAAGACAAGTGA
Protein:  
MFVKKLLVEKASKKPGGISDALKASDVDPHLVFHYGIPLGCCMFAYDSLQKILAISTIDGRIKLFGRDNSQALLESDDAVPSKFLEFIQNQGILVNVNLKNHIEVWDLDKKLLSHVHVLKEDITSFTVMQSGSYMYAGDSVGNIKVLKIDQELGHVVQMKYIIPFSASHGNPTEVSAVVSIMPQPTAESKRILLIFKDGFITLWEIRESKAILVTGGSMFQSVNSEAKHVTSACWVCPFGSKVAVGYSNGEILIWSVPTSKLNNEPASESSIQNAPICKLILGFRSDKIPITWLKWSYADAKATRLYVMGASDVAFTSMLQVVLLNEHTESRTIKLGLHLTEPCVDMVITSRSTEQSKVREDFLLLIGKSGKIYMYDDCSIERYLLQCQSRSPPSLPKEVMLKMPFADSNITVAKLTTDNPALSSDVDYILLSKDIPSLVPLETKPKDGCHYQFSGFGKVKNLYITGHSDGAINFWDLSCPFPIPVLSLKQQSEDNFSLSGVALSALYFDRDSRILVSGDQSGMVRIFQFKPEPYTTENSFISFQVSSKKGNNHVIQSLKVLKVNGSVLSLNISHSTSYLAIGSDQGDVSLVDMEGPSVIFQSHIASDICPGIISLQFKTCSLQNFEKNVLVAAMKDSSVWAFDSNTGNMLTTSMVRPKKPSRALFMQILDWQDLLVRGANMSNSPDTSRGSPVEEGISKQSYILICSEKAAYVYSLIHAIQGVKKVHYKKKFNSTSCCWASTFYTATDVGLMLLFTSGKVEIRSLPELSLLKETSIRGLRYSTPKQNSSSDNSIGFSNCGDFVMVNGDQELFIVSVLLQKESFRILDSISRVYRKELMLSQEVLASGTMIQKEKKKGIFGSVLKDITGSKKNVHVHEVETEDTKESIEELLTIFSTANFPSEVENRDNQEDDFDLDIDDIDLDDSGEKPKEHNILASLNKHKLKFQAFTAGKLKQMKSKNDKPIAKEEQQDEKPSAVDQIKKKYGFSSQGESSAAKMAENKLHENLRKLQGISLKTTEMQDTAKSFSSMARELLRTTEQDK